Environmental Microbiology


Here you can see the list of publications of the Chair of Environmental Microbiology


Barrero Canosa, Jimena; Wang, Luyoa; Oyugi, Angelah; Klaes, Simon; Fischer, Pascal; Adrian, Lorenz; Szewzyk, Ulrich; Cooper, Myriel
Characterization of phage vB_EcoS-EE09 infecting E. coli DSM613 Isolated from Wastewater Treatment Plant Effluent and Comparative Proteomics of the Infected and Non-Infected Host
Microorganisms, 11
November 2023
Klaes, Simon; Maden, Shobhit; Deobald, Darja; Cooper, Myriel; Adrian, Lorenz
GroEL-Proteotyping of Bacterial Communities Using Tandem Mass Spectrometry
International Journal of Molecular Sciences, 24(21)
October 2023
Riedel, Ramona; Krahl, Kathrin; Buder, Kai; Böllmann, Jörg; Braun, Burga; Martienssen, Marion
Novel standard biodegradation test for synthetic phosphonates
Journal of Microbiological Methods
August 2023
Sauter, Daniel; Steuer, Andrea; Wasmund, Kenneth; Hausmann, Bela; Szewzyk, Ulrich; Sperlich, Alexander; Gnirss, Regina; Cooper, Myriel; Wintgens, Thomas
Microbial communities and processes in biofilters for post-treatment of ozonated wastewater treatment plant effluent
Science of The Total Environment, 856 :159265
January 2023
ISSN: 0048-9697


Braun, Burga; Schaudinn, Christoph; Kettner, Marie Therese; Laue, Michael; Schmidt, Bertram; Szewzyk, Ulrich
Proposal of Viadribacter manganicus gen. nov., sp. nov., a neutrophilic manganese depositing bacterium, as member of the family Viadribacteraceae fam. nov.


Ulbrich, Marco; Bültena, Matthias; Braun, Burga; Meißner, Karsten; Bussert, Robert; Flöter, Eckhard
Specific modification of granular potato starch by means of partial debranching using pullulanase.


Ulbrich, Marco; Scholz, Fanni; Braun, Burga; Bussert, Robert; Flöter, Eckhard
High Amylose Corn Starch Gels—Investigation of the Supermolecular Structure
November 2022
Willenbücher, Katharina; Wibberg, Daniel; Huang, Liren; Conrady, Marius; Ramm, Patrice; Gätcke, Julia; Busche, Tobias; Brandt, Christian; Szewzyk, Ulrich; Schlüter, Andreas; Barrero Canosa, Jimena; Maus, Irena
Phage Genome Diversity in a Biogas-Producing Microbiome Analyzed by Illumina and Nanopore GridION Sequencing
Microorganisms, 2022 (10(2)) :368


Zeugner, L. E.; Krüger, K.; Barrero-Canosa, J.; Amann, R. I.; Fuchs, B. M.
In situ visualization of glycoside hydrolase family 92 genes in marine flavobacteria
ISME Communications 1, 2021 (81)
December 2021
Augustyniak, A.; Sikora, P.; Grygorcewicz, B.; Despot, D.; Braun, B.; Rakoczy, R.; Szewzyk, U.; Barjenbruch, M.; Stephan, D.
Biofilms in the gravity sewer interfaces – making a friend from a foe
Reviews in Environmental Science and Bio/Technology (RESB), 20 :795–813
Martínez-Ruiz, E.-B.; Cooper, M.; Barrero-Canosa, J.; Haryono, M. A. S.; Bessarab, I.; Williams, R. B. H.; Szewzyk, U.
Genome analysis of Pseudomonas sp. OF001 and Rubrivivax sp. A210 suggests multicopper oxidases catalyze manganese oxidation required for cylindrospermopsin transformation
BMC Genomics, 22 :1-19
Barrero-Canosa, J.; Moraru, C.
Linking Microbes to Their Genes at Single Cell Level with Direct-geneFISH
Methods Mol Biol., 2021 (2246) :169-205
Heinrich, Lena; Rothe, Matthias; Braun, Burga; Hupfer, Michael
Transformation of redox-sensitive to redox-stable iron-bound phosphorus in anoxic lake sediments under laboratory conditions
Water research, 189 (1)


Dinkel, Eva Annette; Meeder, Alexander; Reul, Winfried; Braun, Burga; Schröder, Josephin; Muhrbeck, Moritz; Scheytt, Traugott; Szewzyk, Ulrich
Groundwater circulation wells for geothermal use and their impact on groundwater quality
Geothermics, 86
July 2020
Publisher: Elsevier
Martínez-Ruiz, E.B.; Cooper, M.; Al-Zeer, J.; Adrian, L.; Szewzyk, U.
Manganese-oxidizing bacteria form multiple cylindrospermopsin transformation products with reduced human liver cell toxicity
Sci. Total Environ. :138924
Martínez-Ruiz, Erika Berenice; Cooper, Myriel; Fastner, Jutta; Szewzyk, Ulrich
Manganese-oxidizing bacteria isolated from natural and technical systems remove cylindrospermopsin
Chemosphere, 238
January 2020
Publisher: Elsevier
Nega, Marcella
Effects of micropollutants on the Panke River microbial communities and degradation of selected pharmaceuticals by manganese-oxidizing bacteria
Technische Universität Berlin
Klang, Johanna; Szewzyk, Ulrich; Bock, Daniel; Theuerl, Susanne
Effect of a Profound Feedstock Change on the Structure and Performance of Biogas Microbiomes
Mocroorganisms, 8 (2)


Nega, Marcella; Braun, Burga; Künzel, Sven; Szewzyk, Ulrich
Evaluating the impact of wastewater effluent on microbial communities in the Panke, an urban river
Water, 11 (5) :888
Schmidt, Bertram
Neutrophile Eisenbakterien
Technische Universität Berlin
Barrero-Canosa, J.; Moraru, C.
PhageFISH for monitoring phage infections at single cell level
Bacteriophages: Methods and Protocols, IV


Braun, Burga; Künzel, Sven; Schröder, Josephin; Szewzyk, Ulrich
Draft genome sequence of the actinobacterial strain Kineosporia sp. R_H_3, a neutrophilic iron-depositing bacterium
Genome Announcement, 6 (15) :e00335-18
April 2018
Braun, Burga; Künzel, Sven; Schröder, Josephin; Szewzyk, Ulrich
Draft genome sequence of strain B_225, an iron-depositing isolate of the genus Novosphingobium
Genome Announcement, 6 (15) :e00325-18
April 2018
Dinkel, E.A.; Braun, B.; Muhrbeck, M.; Meeder, A.; Szewzyk, U.; Scheytt, T.
Groundwater Circulation Wells for Geothermal Use: Preliminary Results of the Project Integralsonde Type II
PROCEEDINGS, 43rd Workshop on Geothermal Reservoir Engineering
February 2018
Schröder, Patrick
Entwicklung eines Frühwarnsystems zur Steigerung der Raum-Zeit-Ausbeute einstufiger NawaRo-Biogasanlagen durch Additivzugabe
Technische Universität Berlin